miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|68426169|gb|AM027224.1|AM027224 CGTTTGGAAAGCTGCTTATAGAGCACCAAGGAATATCATTTTTGCTGGCTGAAATGGCAATGAAAGTTGAACTAGCTAGA
TTGAGTTACCAGAGAGCAGCTTGGGAAGTTGATTCTGGTCGCCGAAATACCTATTATGCCTCTATTGCAAAGGCATATGC
TGGAGATATCGCAAATCAGTTAGCTTCTGATGCTGTTCAGATTTTTGGAGGCAATGGATTTAATACTGAATATCCTGTAG
AAAAATTAATGAGAGATGCCAAGATCTATCAGATTTATGAAGGTACAGCACAAATTCAAAGGCTTATTATAGCCCGTGAA
CACATTGGCAGGTATAAGAAGTAACCAGATCACCGTGTTAATAATCGTTGAGTAATTAGAATATGATCTACTATTTAAAC
TCCAGGAAAGAATAAGGGCTTTAAGGTTTTTTTTCCAGCGAAAATTTTAACATAGGCTCTCATGTACTAAACCTGTATAA
CTGATTCTAATAGTATTAGGTTGGCCAAAAAGTTTGTTTGGGTTTTTTTATAATGTTATGAAAAAACCTGGATGAACTTC
TGGGCCAACCCAAGTTTTCTACTTTTGTTTAACTTTATGACTTGCCTTTTCTATAACACATTTGGTTTTATTAAAGTTAT
GTGTTTTCCTTT




Most similar to sp|Q3SZB4|ACADM_BOVIN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q3SZB4|ACADM_BOVIN Medium-chain specific acyl-CoA dehydrogenase,
           mitochondrial OS=Bos taurus GN=ACADM PE=2 SV=1
          Length = 421

 Score =  224 bits (572), Expect = 3e-58
 Identities = 113/113 (100%), Positives = 113/113 (100%)
 Frame = +3

Query: 3   FGKLLIEHQGISFLLAEMAMKVELARLSYQRAAWEVDSGRRNTYYASIAKAYAGDIANQL 182
           FGKLLIEHQGISFLLAEMAMKVELARLSYQRAAWEVDSGRRNTYYASIAKAYAGDIANQL
Sbjct: 309 FGKLLIEHQGISFLLAEMAMKVELARLSYQRAAWEVDSGRRNTYYASIAKAYAGDIANQL 368

Query: 183 ASDAVQIFGGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIIAREHIGRYKK 341
           ASDAVQIFGGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIIAREHIGRYKK
Sbjct: 369 ASDAVQIFGGNGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIIAREHIGRYKK 421